Gene AccessionOs07g0143700
LocationChr7: 2225652-2231090 (-)
Length5439 bp
IC4R LinksExpression; Homology; Variation; Literature; Wiki
Organism
SynonymLOC_Os07g05050
Uniprot InfoProtein name synonym:
  • -
Entry name2seq:
  • RH53_ORYSJ
Sequence[Download] [View]
Exon(s) number6
Exons & Introns
Length (bp)StrandStartEndPhaseGC (%)Purine (%)Sequence
exon_1332-2230759223109074.39846.084[view]
intron_12560-2228199223075836.71948.594[view]
exon_2128-2228071222819845.31357.813[view]
intron_291-2227980222807034.06647.253[view]
exon_3409-2227571222797940.34251.834[view]
intron_3428-2227143222757034.34646.028[view]
exon_4399-2226744222714242.10550.877[view]
intron_4114-2226630222674332.45648.246[view]
exon_5162-2226468222662940.12359.259[view]
intron_5100-2226368222646732.048.0[view]
exon_6716-2225652222636744.97249.441[view]
Sequence[Download] [View]
Phospho-sites: [View in new window]
Position
Peptide
Source
References
512
DFDGFGSSPNRGGRS
dbPPT, P3DB
511
GDFDGFGSSPNRGGR
dbPPT, P3DB

Ubiquitin and ubiquitin-like conjugation: No result
Eukaryotic protein kinases and protein phosphatases: No result
Gene Ontology:
No related terms
Plant Ontology:
No related terms
Trait Ontology:
No related terms
Enviroment Ontology:
No related terms
QTL/Gene-
Major categoryResistance or Tolerance
Category of object characterDrought tolerance
Characterthe lethal osmotic potential チ@
MarkerRFLP
No of marker for position determination1
LocationChr7: 1538666-2318208
Mapping methodC)Interval
PopulationRIL
No of plants52
LOD5.2
Parent AMoroberekan
Parent B C039
Direction ( Parent )A
Explained variance36
Additive effect1.57
Year1996
Genes located in QTL (127):
Gene AccessionLocation
Os07g0143700Chr7: 2225652-2231090 (-)
Os07g0134101Chr7: 1789196-1794234 (+)
Os07g0142100Chr7: 2175193-2175719 (+)
Os07g0129700Chr7: 1566125-1572085 (+)
Os07g0129800Chr7: 1575296-1579565 (-)
Os07g0144500Chr7: 2257336-2258974 (+)
Os07g0137200Chr7: 1969774-1971942 (+)
Os07g0129900Chr7: 1583658-1585631 (-)
Os07g0143000Chr7: 2197573-2201392 (+)
Os07g0136500Chr7: 1928640-1930430 (-)
Os07g0130100Chr7: 1590912-1593270 (-)
Os07g0133601Chr7: 1770882-1772490 (+)
Os07g0132600Chr7: 1715637-1716780 (+)
Os07g0143900Chr7: 2231961-2234430 (-)
Os07g0132151Chr7: 1698185-1698556 (+)
Os07g0136775Chr7: 1944418-1944681 (-)
Os07g0144732Chr7: 2274921-2276505 (+)
Os07g0137800Chr7: 1992626-1994724 (-)
Os07g0132700Chr7: 1717343-1718517 (-)
Os07g0141650Chr7: 2148712-2148906 (-)
Os07g0130400Chr7: 1603024-1605316 (-)
Os07g0133700Chr7: 1777480-1780450 (+)
Os07g0140566Chr7: 2114746-2116598 (-)
Os07g0131001Chr7: 1626738-1628731 (+)
Os07g0132500Chr7: 1713426-1714497 (+)
Os07g0142200Chr7: 2176824-2177640 (+)
Os07g0139500Chr7: 2084109-2091650 (-)
Os07g0136800Chr7: 1944420-1960442 (+)
Os07g0141500Chr7: 2140736-2143984 (-)
Os07g0139600Chr7: 2092778-2093696 (-)
Os07g0143500Chr7: 2215711-2217178 (-)
Os07g0142050Chr7: 2171775-2172572 (-)
Os07g0132001Chr7: 1686263-1686574 (-)
Os07g0137300Chr7: 1972850-1973092 (-)
Os07g0145033Chr7: 2289924-2290187 (-)
Os07g0140500Chr7: 2112115-2113624 (+)
Os07g0141001Chr7: 2126184-2126429 (+)
Os07g0138450Chr7: 2038043-2038255 (-)
Os07g0139150Chr7: 2065421-2066182 (-)
Os07g0143100Chr7: 2204440-2204832 (+)
Os07g0145300Chr7: 2311418-2311912 (+)
Os07g0140900Chr7: 2124808-2125188 (-)
Os07g0137700Chr7: 1990699-1990986 (+)
Os07g0136725Chr7: 1943271-1943525 (+)
Os07g0144666Chr7: 2261814-2267713 (-)
Os07g0133050Chr7: 1751751-1752236 (-)
Os07g0141300Chr7: 2135107-2136036 (+)
Os07g0144800Chr7: 2285848-2286321 (-)
Os07g0138500Chr7: 2042636-2044185 (-)
Os07g0138000Chr7: 2006605-2007390 (-)
Os07g0138850Chr7: 2052408-2053094 (-)
Os07g0144600Chr7: 2259544-2261313 (-)
Os07g0133400Chr7: 1766558-1766875 (-)
Os07g0139900Chr7: 2099058-2099528 (-)
Os07g0133900Chr7: 1784223-1785426 (+)
Os07g0132901Chr7: 1724339-1724659 (-)
Os07g0138200Chr7: 2023754-2025061 (+)
Os07g0145166Chr7: 2296057-2306218 (-)
Os07g0140766Chr7: 2124334-2124741 (-)
Os07g0136750Chr7: 1943597-1943899 (+)
Os07g0131200Chr7: 1636881-1637633 (+)
Os07g0138700Chr7: 2048563-2050857 (-)
Os07g0133500Chr7: 1770644-1772559 (-)
Os07g0141700Chr7: 2149575-2152124 (-)
Os07g0130450Chr7: 1603273-1605258 (+)
Os07g0130200Chr7: 1595360-1597594 (-)
Os07g0141900Chr7: 2162644-2167146 (-)
Os07g0130800Chr7: 1613795-1616066 (-)
Os07g0131250Chr7: 1637689-1638417 (+)
Os07g0137500Chr7: 1978056-1981459 (-)
Os07g0136400Chr7: 1925715-1927041 (+)
Os07g0140232Chr7: 2100194-2100823 (-)
Os07g0133100Chr7: 1753791-1756075 (+)
Os07g0134650Chr7: 1852481-1856002 (-)
Os07g0136300Chr7: 1912083-1914175 (+)
Os07g0135550Chr7: 1860772-1862444 (+)
Os07g0129600Chr7: 1541408-1543677 (-)
Os07g0136700Chr7: 1937867-1939394 (+)
Os07g0141450Chr7: 2139644-2140459 (-)
Os07g0134600Chr7: 1851404-1856142 (+)
Os07g0136866Chr7: 1960658-1961098 (+)
Os07g0145400Chr7: 2313447-2318963 (-)
Os07g0143401Chr7: 2212152-2213086 (-)
Os07g0134800Chr7: 1860647-1866531 (-)
Os07g0139400Chr7: 2080061-2083382 (+)
Os07g0141100Chr7: 2128467-2130049 (-)
Os07g0134700Chr7: 1856642-1860562 (+)
Os07g0138100Chr7: 2007670-2012928 (+)
Os07g0143200Chr7: 2207230-2210191 (+)
Os07g0134200Chr7: 1812461-1816106 (-)
Os07g0145500Chr7: 2313831-2314848 (+)
Os07g0131375Chr7: 1640079-1643162 (-)
Os07g0142500Chr7: 2181829-2182635 (+)
Os07g0132300Chr7: 1699795-1701036 (+)
Os07g0131600Chr7: 1669310-1671321 (+)
Os07g0145250Chr7: 2306730-2307397 (+)
Os07g0142600Chr7: 2184250-2184996 (+)
Os07g0141400Chr7: 2136871-2138335 (-)
Os07g0141600Chr7: 2144184-2151799 (+)
Os07g0144900Chr7: 2287216-2287491 (+)
Os07g0137600Chr7: 1985492-1987785 (+)
Os07g0130500Chr7: 1606096-1617544 (+)
Os07g0142300Chr7: 2179636-2180493 (+)
Os07g0133000Chr7: 1743475-1745736 (+)
Os07g0139300Chr7: 2067244-2068234 (-)
Os07g0131500Chr7: 1666092-1668002 (-)
Os07g0139000Chr7: 2062181-2063847 (-)
Os07g0137900Chr7: 1996747-2005978 (+)
Os07g0140633Chr7: 2117854-2118368 (-)
Os07g0142000Chr7: 2170647-2172805 (+)
Os07g0138400Chr7: 2035172-2036742 (-)
Os07g0131725Chr7: 1669513-1671074 (-)
Os07g0142900Chr7: 2193809-2196930 (+)
Os07g0142700Chr7: 2187512-2188973 (-)
Os07g0132800Chr7: 1722347-1722812 (-)
Os07g0143800Chr7: 2226468-2230876 (+)
Os07g0130000Chr7: 1588294-1589280 (+)
Os07g0139700Chr7: 2094418-2095167 (+)
Os07g0137000Chr7: 1962092-1966517 (+)
Os07g0142802Chr7: 2190971-2193208 (-)
Os07g0134000Chr7: 1788844-1794564 (-)
Os07g0134500Chr7: 1844593-1848816 (+)
Os07g0133025Chr7: 1743576-1745612 (-)
Os07g0131850Chr7: 1678147-1681684 (-)
Os07g0143600Chr7: 2222974-2224906 (-)
Os07g0132400Chr7: 1701299-1701884 (-)
Os07g0134400Chr7: 1832992-1835740 (-)