Gene AccessionOs01g0102300
LocationChr1: 134300-135439 (+)
Length1140 bp
IC4R LinksExpression; Homology; Variation; Literature; Wiki
Organism
SynonymP0402A09.21; P0455C04.15; P0672D08.41; OsJ_00018
Uniprot InfoProtein name synonym:
  • Os01g0102300 protein
  • P0402A09.21 protein
  • P0455C04.15 protein
  • Putative uncharacterized protein P0672D08.41
  • Uncharacterized protein
Entry name2seq:
  • Q94CX1_ORYSJ
Sequence[Download] [View]
Exon(s) number3
Exons & Introns
Length (bp)StrandStartEndPhaseGC (%)Purine (%)Sequence
exon_1316+134300134615-1,258.86145.886[view]
intron_182+134616134697235.36658.537[view]
exon_2127+1346981348242,065.35444.882[view]
intron_287+134825134911033.33350.575[view]
exon_3528+1349121354390,-153.0348.674[view]
Sequence[Download] [View]
Phospho-sites: [View in new window]

Ubiquitin and ubiquitin-like conjugation: No result
Eukaryotic protein kinases and protein phosphatases: No result
Gene Ontology:
Biological Process
GO:0008150biological_process
Cellular Component
GO:0009579thylakoid
GO:0009536plastid
Molecular Function
GO:0003674molecular_function
Plant Ontology:
No related terms
Trait Ontology:
No related terms
Enviroment Ontology:
No related terms
QTL/GeneGc
Major categoryOthers
Category of object characterOthers
Characterchlorophyll content
MarkerSSR
No of marker for position determination2
LocationChr1: 85323-1059644
Mapping methodB)Fine
PopulationBC6F2
No of plants300
LOD-
Parent AChongqing 2
Parent BZhenshan 97B
Direction ( Parent )-
Explained variance-
Additive effect-
Year2007
Genes located in QTL (20):
Gene AccessionLocation
Os01g0102700Chr1: 148085-150568 (+)
Os01g0102500Chr1: 141959-144554 (+)
Os01g0102300Chr1: 134300-135439 (+)
Os01g0102000Chr1: 89763-91465 (-)
Os01g0103050Chr1: 172587-175073 (+)
Os01g0102850Chr1: 164577-168921 (+)
Os01g0103700Chr1: 191037-196287 (+)
Os01g0103400Chr1: 185189-185828 (-)
Os01g0102800Chr1: 152853-156449 (+)
Os01g0101900Chr1: 88883-89228 (-)
Os01g0103075Chr1: 178815-180433 (-)
Os01g0102600Chr1: 145603-147847 (+)
Os01g0103650Chr1: 187545-188586 (+)
Os01g0102900Chr1: 169390-170316 (-)
Os01g0103000Chr1: 170798-173144 (-)
Os01g0103100Chr1: 178607-180575 (+)
Os01g0101850Chr1: 86211-88583 (-)
Os01g0102400Chr1: 139826-141555 (+)
Os01g0103600Chr1: 186250-190904 (-)
Os01g0101800Chr1: 85337-88844 (+)
NCBI Gene:
Unigene:
Refseq:
Uniprot:
Interpro:
Pfam:
EC:
KEGG protein: