Gene AccessionOs01g0101800
LocationChr1: 85337-88844 (+)
Length3508 bp
IC4R LinksExpression; Homology; Variation; Literature; Wiki
Organism
SynonymP0672D08.25; OsJ_00015
Uniprot InfoProtein name synonym:
  • Os01g0101800 protein
  • Putative uncharacterized protein P0672D08.25
  • Uncharacterized protein
Entry name2seq:
  • Q655M3_ORYSJ
Sequence[Download] [View]
Exon(s) number7
Exons & Introns
Length (bp)StrandStartEndPhaseGC (%)Purine (%)Sequence
exon_1264+8533785600-1,067.42448.106[view]
intron_1136+8560185736046.32438.971[view]
exon_294+85737858300,162.76639.362[view]
intron_2104+8583185934146.15431.731[view]
exon_3152+85935860861,044.07948.684[view]
intron_3125+8608786211036.836.0[view]
exon_488+86212862990,152.27345.455[view]
intron_499+8630086398142.42440.404[view]
exon_51283+86399876811,045.67453.78[view]
intron_5609+8768288290035.63248.604[view]
exon_6108+88291883980,058.33361.111[view]
intron_6101+8839988499040.59449.505[view]
exon_7345+88500888440,-141.73953.333[view]
Sequence[Download] [View]
Phospho-sites: [View in new window]

Ubiquitin and ubiquitin-like conjugation: No result
Eukaryotic protein kinases and protein phosphatases: No result
Gene Ontology:
Biological Process
GO:0008150biological_process
Cellular Component
GO:0009536plastid
Molecular Function
GO:0003674molecular_function
Plant Ontology:
No related terms
Trait Ontology:
No related terms
Enviroment Ontology:
No related terms
QTL/GeneGc
Major categoryOthers
Category of object characterOthers
Characterchlorophyll content
MarkerSSR
No of marker for position determination2
LocationChr1: 85323-1059644
Mapping methodB)Fine
PopulationBC6F2
No of plants300
LOD-
Parent AChongqing 2
Parent BZhenshan 97B
Direction ( Parent )-
Explained variance-
Additive effect-
Year2007
Genes located in QTL (20):
Gene AccessionLocation
Os01g0102600Chr1: 145603-147847 (+)
Os01g0103650Chr1: 187545-188586 (+)
Os01g0102900Chr1: 169390-170316 (-)
Os01g0103000Chr1: 170798-173144 (-)
Os01g0103100Chr1: 178607-180575 (+)
Os01g0101850Chr1: 86211-88583 (-)
Os01g0102400Chr1: 139826-141555 (+)
Os01g0103600Chr1: 186250-190904 (-)
Os01g0101800Chr1: 85337-88844 (+)
Os01g0102700Chr1: 148085-150568 (+)
Os01g0102500Chr1: 141959-144554 (+)
Os01g0102300Chr1: 134300-135439 (+)
Os01g0102000Chr1: 89763-91465 (-)
Os01g0103050Chr1: 172587-175073 (+)
Os01g0102850Chr1: 164577-168921 (+)
Os01g0103700Chr1: 191037-196287 (+)
Os01g0103400Chr1: 185189-185828 (-)
Os01g0102800Chr1: 152853-156449 (+)
Os01g0101900Chr1: 88883-89228 (-)
Os01g0103075Chr1: 178815-180433 (-)
NCBI Gene:
Unigene:
Refseq:
Uniprot:
Interpro:
Pfam:
EC:
KEGG protein: