Gene Summary
Genomic Context
Transcripts
Expression
Homology
Variation
Post-translational Modification
Literature
Community Annotation
Genome Browser
Ontology
QTL
Additional Links
Top
Gene AccessionOs01g0101600
LocationChr1: 72816-78349 (+)
Length5534 bp
IC4R LinksExpression; Homology; Variation; Literature; Wiki
Organism
  • Ehrhartoideae
  • Oryzeae
  • Oryza
    • SynonymP0672D08.22; OsJ_00013
    Uniprot InfoProtein name synonym:
    • Nuclear protein-like
    • Os01g0101600 protein
    • Uncharacterized protein
    • cDNA clone:J013123J12, full insert sequence
    • cDNA clone:J033128C08, full insert sequence
    Entry name2seq:
    • Q655M5_ORYSJ
    Sequence[Download] [View]
    Exon(s) number1
    Exons & Introns
    Length (bp)StrandStartEndPhaseGC (%)Purine (%)Sequence
    exon_11758+759427769940.3355.29[view]
    Sequence[Download] [View]
    Exon(s) number4
    Exons & Introns
    Length (bp)StrandStartEndPhaseGC (%)Purine (%)Sequence
    exon_11120+7281673935-1,167.14342.5[view]
    intron_1532+7393674467134.96244.549[view]
    exon_2514+74468749811,247.47156.809[view]
    intron_2637+7498275618232.33945.526[view]
    exon_31587+75619772052,-142.91157.467[view]
    intron_3127+7720677332-140.94549.606[view]
    exon_41017+7733378349-1,-137.56145.428[view]
    Sequence[Download] [View]
    Exon(s) number3
    Exons & Introns
    Length (bp)StrandStartEndPhaseGC (%)Purine (%)Sequence
    exon_11113+7282373935-1,167.11642.677[view]
    intron_1532+7393674467134.96244.549[view]
    exon_2514+74468749811,247.47156.809[view]
    intron_2637+7498275618232.33945.526[view]
    exon_32081+75619776992,-141.71155.07[view]
    Sequence[Download] [View]
    Phospho-sites: [View in new window]
    Position
    Peptide
    Source
    References
    657
    KGSKLSPTRDHHSSR
    dbPPT, P3DB
    67
    QASRDAYSDADDDDD
    dbPPT, P3DB
    62
    PSSPAQASRDAYSDA
    dbPPT, P3DB
    56
    DDDLHRPSSPAQASR
    dbPPT, P3DB
    543
    RRSRRSRSYSPPVRH
    dbPPT, P3DB
    57
    DDLHRPSSPAQASRD
    dbPPT, P3DB
    863
    KSEEGSKSRKDDCLL
    dbPPT, P3DB
    873
    DDCLLDDTLSSDRRK
    dbPPT, P3DB
    731
    VAHKRSSSASEDEML
    dbPPT, P3DB
    631
    RHREESLSPSKSRRS
    dbPPT, P3DB
    629
    PKRHREESLSPSKSR
    dbPPT, P3DB
    876
    LLDDTLSSDRRKVQS
    dbPPT, P3DB
    541
    KYRRSRRSRSYSPPV
    dbPPT, P3DB
    544
    RSRRSRSYSPPVRHT
    dbPPT, P3DB
    733
    HKRSSSASEDEMLNS
    dbPPT, P3DB
    730
    SVAHKRSSSASEDEM
    dbPPT, P3DB
    66
    AQASRDAYSDADDDD
    dbPPT, P3DB
    875
    CLLDDTLSSDRRKVQ
    dbPPT, P3DB

    Ubiquitin and ubiquitin-like conjugation: No result
    Eukaryotic protein kinases and protein phosphatases: No result
    Gene Ontology:
    Biological Process
    GO:0008150biological_process
    Molecular Function
    GO:0000166nucleotide binding
    GO:0005488binding
    GO:0003676nucleic acid binding
    Plant Ontology:
    No related terms
    Trait Ontology:
    No related terms
    Enviroment Ontology:
    No related terms
    No QTL information